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infant gut metagenomic shotgun  (ATCC)


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    ATCC infant gut metagenomic shotgun
    Infant Gut Metagenomic Shotgun, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/infant+gut+metagenomic+shotgun/Genomic+DNA+from+Leishmania+infantum+strain+MHOM%2FTN%2F80%2FIPT-1/pm39265573-917-124-133
    Average 93 stars, based on 7 article reviews
    infant gut metagenomic shotgun - by Bioz Stars, 2026-10
    93/100 stars

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    other:

    Article Title: Human milk variation is shaped by maternal genetics and impacts the infant gut microbiome
    Article Snippet: We aligned the infant gut metagenomic shotgun reads to the B. infantis ATCC 15697 reference genome, downloaded from NCBI, using bowtie2 v2.2.491.

    Article Title: Human milk variation is shaped by maternal genetics and impacts the infant gut microbiome
    Article Snippet: We aligned the infant gut metagenomic shotgun reads to the B. infantis ATCC 15697 reference genome, downloaded from NCBI, using bowtie2 v2.2.4.

    Generated:

    Article Title: Human milk variation is shaped by maternal genetics and impacts the infant gut microbiome.
    Article Snippet: .. To generate network interaction plots between milk-expressed genes and infant fecal microbes identified in the sparse CCA analysis, for each significantly enriched pathway (q value < 10%) in a component, we (1) filtered for overlapping genes between the component and pathway; (2) generated a pairwise correlation matrix of mother-infant pairs’ trait values for those genes, the top 3 microbiome traits in the component with positive weights, and top 3 microbiome traits with negative weights; (3) pruned for correlations with Pearson’s r > 0.3 and p < 0.05; (4) generated a network plot from the pairwise correlation matrix using the ‘ggnetwork’ package in R.103 Cell Genomics 4, 100638, October 9, 2024 e8 B. infantis growth rates were estimated using Compute PTR (CoPTR).61 We aligned the infant gut metagenomic shotgun reads to the B. infantis ATCC 15697 reference genome, downloaded from NCBI, using bowtie2 v2.2.4.100 We then used CoPTR to get coverage information for each mapped sample, filtering for samples with at least 75% coverage and at least 3000 mapped reads to the B. infantis genome. ..



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    infant gut metagenomic shotgun  (ATCC)
    93
    ATCC infant gut metagenomic shotgun
    Infant Gut Metagenomic Shotgun, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/infant+gut+metagenomic+shotgun/Genomic+DNA+from+Leishmania+infantum+strain+MHOM%2FTN%2F80%2FIPT-1/pm39265573-917-124-133
    Average 93 stars, based on 1 article reviews
    infant gut metagenomic shotgun - by Bioz Stars, 2026-10
    93/100 stars
    		  Buy from Supplier

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